Lines Matching refs:which
110 # which are not suitably aligned with the coordinate axes of the reference coordinate system
344 # where n is an integer 1,2,3... that selects which set is to be displayed and
880 …based), or "N" (amide-nitrogen based). The default is alpha-carbon based, which corresponds closel…
1457 # code: fixing inappropriate calls to getOpenFileError(), which actually creates the model set.
1934 # -- new _ShapeSurface.jar, which now includes org.jmol.jvxl/**
1963 # new feature: applet console has "help" menu item, which includes several hundred items.
2324 # new feature: "quaternion derivative" --> "quaternion difference", which is more
2355 # using quaternionFrame "p", which I define as
2438 # new feature: signed applet shows frank "Jmol-S" which is NOT removable.
2456 # which overrides the default behavior and disallows reading of files from
2759 # allows setting isosurface values using a block of x y z data, all points for which should be
2803 # also, minimize ENERGY saves a detailed listing, which can be
3138 # new feature: getProperty("appletInfo") includes a key "registry" for which
3329 # in which case "select 1.3", if file 1 is a trajectory, not only
3573 # new feature: JmolManifest in a zip file directs which files to load and in what order
3878 # there is a priority in Jmol, but not yet clear to me which. The current priority
4010 # buttons which open the info in the standard Jmol Help Dialog.
4166 # which actually will not work in ScriptWindow. We need the direct execution in
4828 # bug fix for select {*}[0], {*}[-1], etc., which now counts from the end back
5133 # is to be allowed, simply remove the MAYSCRIPT parameter, which
5207 # based on the VERY latest version (not released yet), which includes
5239 # EXCEPT "isosurface delete", which deletes all isosurfaces.
5391 # adds "bwr" colorscheme as opposed to "rwb", which I think is backward.
5504 # operands are atom expressions, in which case these operate directly on the
5577 # string format, which can be used in numerous commands.