Lines Matching refs:load
25 # bug fix: applet cannot load inline
91 # bug fix: zshade not resetting properly; now reset off with reset() or load of model
109 # bug fix: CASTEP and AIMS readers now properly load unit cells using cell vectors
117 # bug fix: strand count assignment error in cif/pdb readers causes failure to load 3ovo.cif
163 # bug fix: file drop needs zap prior to load for cleaner operation
173 # bug fix: load trajectory not working properly
208 # bug fix: load append of file with ellipsoids causes array out of bounds exception
241 # load t.jpg (Or just drag it into the Jmol window from a file directory.
284 # bug fix: (application) delaying saveChooser load makes startup MUCH faster when loading a file
303 # TODO: load 1crn.pdb;quaternion;quaternion diff;zap 2.1 -- leaves blank model 2.1 and destroys sta…
399 # bug fix: spacegroup "-- [--]" displayed when load command option SPACEGROUP is used
454 # bug fix: load trajectory XXX.cif not applying fractional coordinates.
455 # bug fix: load trajectory {0 -1 1} not loading any models if first model has 0 atoms
475 # that load scripts into a "script editor" and allow stepping through
570 …t change: load trajectory "myfile.top" COORD {first,last,stride} "mdcrd::myfile.trj" defaults to l…
576 # new feature: load ("filename", nBytesMax) --- and returns "java.io.FileNotFoundException" if file
578 # would be if (load("filename",0).length == 0)...
593 # bug fix: load @filename
745 # new feature: load "@x" -- inline load of data contained in variable x.
991 # new feature: load XYZ ... loads just the XYZ coordinates, in sequence, based on selected atoms.
1001 # new feature: load OCCUPANCY ... int [0 to 255]
1002 # new feature: load PARTIALCHARGE ... float ~[-3.4 x 10^38 to 3.4 x 10^38]
1003 # new feature: load TEMPERATURE ... float [-327.68 to 327.67], with 0.01 precision (stored as sho…
1012 # new feature: load VIBRATION "filename" n .......
1013 # --all features of the load command, but only loads the vibrational information
1015 # --optional n is just as for any load -- optional nth model
1017 # --allows embedded jmolscript, just as for any load
1020 # bug fix: load {n n n} not saved in state
1021 # new feature: load {a b -c} packs a x b x c cells
1097 # bug fix: data "append" does not set model the way load "append" does
1121 # bug fix: load file:///xxx.xxx (file:/// with file in root path) causes unrecoverable exception
1124 # new feature: load xxxx FILTER "NBOcharges" loads NBO charges instead of Mulliken
1137 # bug fix: load MANIFEST not working properly
1142 # load "xxx.gamess" filter "!EIGEN" # to only load NBOs; by default ALL MOs are loaded.
1172 # load t.spardir
1267 # bug fix: PDB load filter broken for ANISOU
1296 # new feature: load "myfile.cif" {ijk i'j'k' -1}
1298 # new feature: load "myfile.cif" PACKED
1374 # jmol.viewer.scriptWait("load =1crn;cartoons on;set antialiasdisplay");
1438 # new feature: load xxx.gamess FILTER "natural,optimized"
1439 # new feature: load xxx.gamess FILTER "!natural,!initial"
1459 # jmolAppendInlineArray, jmolAppendInlineScript all return load error message
1515 # load =1crn;calculate straightness;color "bwr" range 0 1;color straightness
1609 # code: Eval load conversion of param[] values to htParams entries
1617 # bug fix: load string inline with multiple models fails
1648 # new feature: load MODELS ({bitset})|{first,last,stride}
1649 # new feature: load TRAJECTORY ({bitset})|{first,last,stride}
1650 # new feature: load APPEND MODELS ({bitset})|{first,last,stride}
1651 # new feature: load APPEND TRAJECTORY ({bitset})|{first,last,stride}
1652 # new feature: load APPEND "[topolopy file]" COORD ({bitset})|{first,last,stride} "mdcrd::md1.crd C…
1653 # new feature: load FILES "[topology file]" COORD ({bitset})|{first,last,stride} "mdcrd::md1.crd CO…
1692 # new feature: load of molecular dynamics topology file and coordinates
1694 # load files "u.mdtop" FILTER "![WAT],![URE]" COORD {0 -1 1} "mdcrd::u.mdcrd" ;
1704 # load files "u.mdtop" FILTER "![WAT],![URE]" COORD {0 -1 1} "mdcrd::u1.mdcrd" "mdcrd::u2.mdcrd"…
1721 # bug fix: load "/xxx" with unsigned remote applet loads local file instead of remote root directory
1764 # bug fix: CML reader failst to load primitive lattice parameters when no symmetry
1772 # new feature: load menu items for signed applet
1776 # new feature: signed applet allows "load ?" and includes previewer
1779 # new feature: signed applet/application load ?xxx uses load dialog
1780 # webexport help updated to reflect ability to handle files opened with "load append"
1938 # -- basic minimum load involves just JmolApplet0.jar + _Core, _Jars, _Main, _Popup, and _Viewer
2296 # bug fix: load trajectory for cases with different atom counts.
2303 # load =1d66
2396 # new feature: "load" of Jmol state scripts works same as "script" command
2445 # the two independent processors. (just to isolate javascript from load commands
2460 # contain both load/script commands or the load() function
2463 # JavaScript thread, and the load command -- if crossing server boundaries --
2482 # array of points to load causes null pointer exception:
2483 # load cyclohexane_movie.xyz;pts = {C5}.split();print pts;draw @{pts.xyz.sub({1 0 0})} "X"
2578 # bug fix: load FILTER not saved in state
2594 # new feature: more load FILTER options:
2610 # new feature: load [file info] FILTER "BIOMOLECULE n;NOSYMMETRY"
2612 # use load FILTER "BIOMOLECULE 1;NOSYMMETRY" to not read symmetry
2621 # bug fix: load FILTER "BIOMOLECULE 1;APPLY SYMMETRY" does not read second line of chain list
2627 # new feature: load [file info] FILTER "[filter string]"
2628 # new feature: load [file info] FILTER "BIOMOLECULE n"
2629 # new feature: load [file info] FILTER "[filter string];BIOMOLECULE n"
2639 # load "1sva.pdb" FILTER "*.CA"
2739 # note that for now PDB file reading of ANISOU requires using {x y z} in load
2740 # command, but you can use {1 1 0} to load ANISOU without applying symmetry
2772 # bug fix: hover appears when a load script leaves an atom very close to (0,0) in the window
2867 # load caffeine.xyz
2881 # bug fix: load unitcell {a b c alpha beta gamma} not working (since 11.5.8)
3102 # bug fix: labels not scaling properly when in script with file load
3225 # bug fix: CIF reader not skipping loops with load of a specific model of a model set
3248 # bug fix: load "files" not properly loading zip files or files involving default directory
3328 # bug fix: load trajectory extended to multifile context
3339 # bug fix: load append not saved in state properly
3373 # bug fix: "load trajectory" broken
3432 # code: optimization of algorithm used for load RANGE
3433 # modification for load RANGE -x.x (within x.x Angstroms of symop=1555) to be within x.x of the
3467 # bug fix: load =xxxx broken in 11.3.50
3509 # new feature: load "myfile.zip|CH3CL.MOL"
3512 # new feature: load "myfile.zip|myfile2.zip|CH3CL.MOL"
3572 # new feature: load "myfile.zip" MANIFEST "...."
3573 # new feature: JmolManifest in a zip file directs which files to load and in what order
3584 # IGNORE_MANIFEST --- (on the load command line) indicates that the internal ZIP file manifest…
3594 # new feature: load xxx.zip n # where n is the desired file, starting with 1
4175 # bug fix for WebPageMaker not stripping \ in load file names
4495 # load menu jmol.mnu
4514 # load menu jmol.mnu
4619 # bug fix: load multiple files inline causes null pointer exception
4661 # new feature: symmetryRange: load "someFile" {mmm nnn 1|0} range x.x where x.x is a maximum dist…
4876 # bug fix for strandcount saved explicitly forces bioshape load
4896 # bug fix for load append and structure commands
4897 # bug fix for load files losing structure and cartoons
4914 # bug fix for load with explicit spacegroup not respecting normalization choice
4919 # bug fix for structure loss on load append. (structure is supposed to be recalculated).
4929 # bug fix for load append with spacegroups causing atoms to be repositioned
4940 # bug fix for select symop=3555 not giving proper atoms when load "" {444 666 0}
5142 # to atoms, as in "load xxx.cif {1 1 1}", to also apply symmetry
5163 # adds load TRAJECTORY -- for a single file with multiple models all with
5302 # load file "=xxxx" and set loadFormat "http://....../%FILE.....
5303 # load files ..... # just a cleaner version of loading multiple files.
5304 # load append ..... # APPENDS the file(s) or model(s) as new frames onto the current set.
5346 # colors and sizes persist past file load
5380 # x = load("file.dat");
5627 # x = load("filename")
5864 # load xxxx.spt # minimal -- just coord.
5865 # script xxxx.spt # this is the full state load