Lines Matching refs:i
37 # bug fix: label %i not working
438 # "angle" -- rotation around local heix axis for resno i --> i+1
494 # function testing(i,j) {
548 # function incrementA(a, i) { a[i]++ }
622 # for (i = 1; i <= 10; i++) {print {*}[i].radius}
623 # for (i = 0; ++i <= 10;) {print {*}[i].temperature}
624 # if (var i < 10) {{*}[i].radius *= 2} else {spacefill off;wireframe}
625 # i = 0; while (++i < 10) {select {*}[i * 2]; color red }
681 # i++
682 # ++i
683 # i += 3
688 # for (i = 1; i <= 10; i++) {print {*}[i].radius}
689 # for (i = 0; ++i <= 10;) {print {*}[i].temperature}
690 # if (i < 10) { {*}[i].radius *= 2}
691 # i = 0; while (++i < 10) {select {*}[i]; color red }
698 # for (i = 1; i <= 10; i++) print {*}[i].radius
700 # if (i < 10) { {*}[i].radius *= 2}
702 # for (i = 1; i < 10; i++) print i
703 # if (i < 10) print i
763 # for (i = 1; i <= natoms; i = i + 1)
842 # yes i yes atomno sequential number
866 # yes I yes ionic radius used for bonding (<b>i</b>onic radius when a formal charge is defined)
880 …volving three consecutive residues i-1, i, and i+1: -psi<sub>i-1</sub> - phi<sub>i</sub> + psi<sub…
928 # %[atomno] %i
1058 # "i" (case insensitive)
1296 # new feature: load "myfile.cif" {ijk i'j'k' -1}
1335 # bug fix: application -i option still gives message from "set xxxx"
2069 # bug fix: quaternion derivative DRAW arrows placed on residue i+1 instead of residue i
2185 # bug fix: f(x[i],x[j]) selects only x[j], not both x[i] and x[j]
2298 # experimental: "straightness" defined as 1 - 2 * acos(normal(dq[i]%-1) dot normal(dq[i+1])) / PI
2317 # bug fix: quaternion derivative for i/i+1 assigned to i+1 instead of i; now assigned to i
2360 # vB = C--N[i+1]
2375 # dq1 === q[i] * q[i-1]_inverse
2376 # dq2 === q[i+1] * q[i]_inverse
2596 # #i a specific BIOMT transformation
2597 # !#i not a specific BIOMT transformation
3048 # new feature: DATA "property_x i j" .... END "property_x i j"
3049 # overrides default propertyAtomNumberField (i) and propertyDataField (j)
3793 # bug fix: memory leak in merge -- models[i].modelSet causes modelSet to not finalize.
4079 # for(var i = 1; i < 3; i = i + 1); {(*)[i]}.x = 5;end for;
4144 # bug fix for atomarray[i] not selecting properly
4203 # var i = 4
4204 # if (i = 3)
4205 # print "i=3"
4206 # else if (i = 4)
4207 # print "i=4"
4208 # else if (i = 5)
4209 # print "i=5"
4212 # var i = 5
4213 # while ( i > 0)
4214 # print "atom " + i + " " + {atomno=i}.ident + " is at " + {atomno=i}.xyz
4215 # i = i - 1
4219 # for (i = 1; i <= n; i = i + 1)
4220 # for (j = i + 1;j <= n; j = j + 1)
4222 # var dist = {atomno=i}.distance({atomno=j})
4225 # print "i-j: " + i + "," + j + " " + dist%2
4226 # measure {atomno=i} {atomno=j}
4232 # var i = 4
4233 # while ( i > 0)
4234 # print "in while: i="+i
4235 # if (i = 2);print "i is 2";endif
4236 # i = i - 1
5107 # for (var i = 0; i < nX; i++)
5109 # s += "x_"+i+"\ty_"+j+"\t"+func(i,j)+"\n"
5123 # for (var i = 0; i < nX; i++)
5125 # fxy[i][j] = func(i,j)
5534 # x_set = "({i j k ...})"
5633 # Implements ({i j:k m n}) bitset option across all commands
5768 # pdbAtomData = {selected and not hetero}.label("ATOM %5i %-4a%1A%3n %1c%4R%1E %8.3x%8.3y%8.3z%6…
5769 # pdbHeteroData = {selected and hetero}.label("HETATM%5i %-4a%1A%3n %1c%4R%1E %8.3x%8.3y%8.3z%6…