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Searched refs:pdbid (Results 1 – 5 of 5) sorted by relevance

/plugin/pdb/classes/
H A D_RCSB.php26 $pdbid = $this->PDBformat($pdbid);
27 if ($pdbid===false) return false;
37 function ExplorerURL($pdbid){ argument
38 $pdbid = $this->PDBformat($pdbid);
39 if ($pdbid===false) return false;
46 $pdbid = $this->PDBformat($pdbid);
47 if ($pdbid===false) return false;
49 return sprintf($this->LinkFormat,$pdbid,$class,strtoupper($pdbid));
52 function PDBformat($pdbid){ argument
53 $pdbid=strtolower(urlencode($pdbid));
[all …]
/plugin/pubchem/classes/
H A D_RCSB.php25 function DownloadImage($pdbid,$path){ argument
26 $pdbid = $this->PDBformat($pdbid);
27 if ($pdbid===false) return false;
29 $downloadURL = sprintf($this->ImgURL,$pdbid);
37 function ExplorerURL($pdbid){ argument
38 $pdbid = $this->PDBformat($pdbid);
39 if ($pdbid===false) return false;
40 return sprintf($this->LinkURL,$pdbid);
45 ExplorerLink($pdbid, $class = 'pdb_plugin_acc') global() argument
52 PDBformat($pdbid) global() argument
[all...]
/plugin/pubmed/classes/
H A D_RCSB.php25 function DownloadImage($pdbid,$path){ argument
26 $pdbid = $this->PDBformat($pdbid);
27 if ($pdbid===false) return false;
29 $downloadURL = sprintf($this->ImgURL,$pdbid);
37 function ExplorerURL($pdbid){ argument
38 $pdbid = $this->PDBformat($pdbid);
39 if ($pdbid===false) return false;
40 return sprintf($this->LinkURL,$pdbid);
45 ExplorerLink($pdbid, $class = 'pdb_plugin_acc') global() argument
52 PDBformat($pdbid) global() argument
[all...]
/plugin/pdb/
H A Dsyntax.php50 list($cmd,$pdbid) = $query;
51 $pdbid = urlencode($pdbid);
63 $summaryXML = $this->getSummaryXML($pdbid);
79 $summaryXML = $this->getSummaryXML($pdbid);
100 $summaryXML = $this->getSummaryXML($pdbid);
110 $renderer->doc.=$pdbid." was not found.";
141 function getImageHtml($pdbid,$type){ argument
142 $pdbid = $this->rcsb->PDBformat($pdbid);
143 if ($pdbid===false) return NULL;
144 $url = $this->imgCache->GetMediaLink($pdbid);
[all …]
/plugin/jmol2/jmol/
H A DJmol.js1450 function jmolLoadAjax_STOLAF_RCSB(fileformat,pdbid,optionalscript,targetSuffix){ argument
1457 if(!pdbid)pdbid=prompt("Enter a 4-digit PDB ID:",_jmol.thismodel)
1458 if(!pdbid || pdbid.length != 4)return ""
1461 var url=_jmol.defaultURL_RCSB.replace(/1CRN/g,pdbid.toUpperCase())
1464 _jmol.thismodel=pdbid