<?php /** * Hoa * * * @license * * New BSD License * * Copyright © 2007-2017, Hoa community. All rights reserved. * * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: * * Redistributions of source code must retain the above copyright * notice, this list of conditions and the following disclaimer. * * Redistributions in binary form must reproduce the above copyright * notice, this list of conditions and the following disclaimer in the * documentation and/or other materials provided with the distribution. * * Neither the name of the Hoa nor the names of its contributors may be * used to endorse or promote products derived from this software without * specific prior written permission. * * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS AND CONTRIBUTORS BE * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE * POSSIBILITY OF SUCH DAMAGE. */ namespace Hoa\Ustring\Test\Unit; use Hoa\Test; use Hoa\Ustring as LUT; /** * Class \Hoa\Ustring\Test\Unit\Search. * * Test suite of the search algorithms. * * @copyright Copyright © 2007-2017 Hoa community * @license New BSD License */ class Search extends Test\Unit\Suite { public function case_approximated() { $this ->given( $x = 'GATAA', $y = 'CAGATAAGAGAA', $k = 1 ) ->when($result = LUT\Search::approximated($y, $x, $k)) ->then ->array($result) ->isEqualTo([ 0 => [ 'i' => 1, 'j' => 6, 'l' => 5 ], 1 => [ 'i' => 2, 'j' => 7, 'l' => 5 ], 2 => [ 'i' => 3, 'j' => 8, 'l' => 5 ], 3 => [ 'i' => 7, 'j' => 12, 'l' => 5 ] ]); } }