Lines Matching refs:pdbid

50     list($cmd,$pdbid) = $query;
51     $pdbid = urlencode($pdbid);
55       $filename = $this->imgCache->GetMediaPath($pdbid);
56       if ($this->rcsb->DownloadImage($pdbid,$filename)!==false)
57         $renderer->doc.= $this->getImageHtml($pdbid,$cmd).NL;
63       $summaryXML = $this->getSummaryXML($pdbid);
65         $renderer->doc.= $this->getTextHtml($pdbid,$cmd,$summaryXML);
71       $filename = $this->imgCache->GetMediaPath($pdbid);
72       if ($this->rcsb->DownloadImage($pdbid,$filename)!==false)
73         $imageHtml = $this->getImageHtml($pdbid,"small").NL;
79       $summaryXML = $this->getSummaryXML($pdbid);
81         $textHtml = $this->getTextHtml($pdbid,"long",$summaryXML);
96         $renderer->doc .= $this->rcsb->ExplorerLink($pdbid);
100         $summaryXML = $this->getSummaryXML($pdbid);
105         $summaryXML = $this->getSummaryXML($pdbid);
110         $renderer->doc.=$pdbid." was not found.";
141   function getImageHtml($pdbid,$type){  argument
142     $pdbid = $this->rcsb->PDBformat($pdbid);
143     if ($pdbid===false) return NULL;
144     $url = $this->imgCache->GetMediaLink($pdbid);
146     $html = '<a href="'.$this->rcsb->ExplorerURL($pdbid).'"><div class="pdb_image'.$w.'">';
147     $html.= '<img src="'.$url.'" alt="PDB image" title="'.$pdbid.'" width="'.$w.'"/>';
155   function getTextHtml($pdbid,$type,$summaryXML){  argument
162     $html ='<div class="pdb_plugin"><a href="'.$this->rcsb->ExplorerURL($pdbid).'">';